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Links & References
Krutzik et al..
High-content single cell drug screening with phospho-specific flow cytometry, Nature Chemical Biology, doi: 10.1038/nchembio.2007.59, published online 23 December 2007.
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Validated by Experts, Validated by Users, Non-Validated, Removed by Users, Redirected by Users, Redirect Approved by Experts
[4-Hydroxy-2-[(4-methoxyphenyl)methyl]pyrrolidin-3-yl] acetate
Validated by Experts, Validated by Users, Non-Validated, Removed by Users, Redirected by Users, Redirect Approved by Experts
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LogP: |
ACD/LogP:
0.42
XLogP:
0.80
ALOGPS:
0.97
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# of Rule of 5 Violations: |
0
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ACD/LogD (pH 5.5): |
-2.28
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ACD/LogD (pH 7.4): |
-0.63
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ACD/BCF (pH 5.5): |
1
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ACD/BCF (pH 7.4): |
1
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ACD/KOC (pH 5.5): |
1
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ACD/KOC (pH 7.4): |
3.6
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#H bond acceptors: |
5
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#H bond donors: |
2
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#Freely Rotating Bonds: |
6
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Polar Surface Area: |
48
Å2
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|
Index of Refraction: |
1.557
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Molar Refractivity: |
70.46
cm3
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Molar Volume: |
218.6
cm3
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Polarizability: |
27.93
10-24cm3
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Surface Tension: |
48.7
dyne/cm
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Density: |
1.21
g/cm3
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Flash Point: |
194.9
°C
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Enthalpy of Vaporization: |
68.48
kJ/mol
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Boiling Point: |
398.7
°C at 760 mmHg
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Vapour Pressure: |
4.5E-07
mmHg at 25°C
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Log Octanol-Water Partition Coef (SRC):
Log Kow (KOWWIN v1.67 estimate) = 0.61
Boiling Pt, Melting Pt, Vapor Pressure Estimations (MPBPWIN v1.42):
Boiling Pt (deg C): 384.94 (Adapted Stein & Brown method)
Melting Pt (deg C): 144.87 (Mean or Weighted MP)
VP(mm Hg,25 deg C): 3.48E-008 (Modified Grain method)
MP (exp database): 140.5 deg C
Subcooled liquid VP: 5.1E-007 mm Hg (25 deg C, Mod-Grain method)
Water Solubility Estimate from Log Kow (WSKOW v1.41):
Water Solubility at 25 deg C (mg/L): 5.965e+004
log Kow used: 0.61 (estimated)
no-melting pt equation used
Water Sol (Exper. database match) = 6550 mg/L (28 deg C)
Exper. Ref: YALKOWSKY,SH & DANNENFELSER,RM (1992)
Water Sol Estimate from Fragments:
Wat Sol (v1.01 est) = 1.1109e+005 mg/L
Wat Sol (Exper. database match) = 6550.00
Exper. Ref: YALKOWSKY,SH & DANNENFELSER,RM (1992)
ECOSAR Class Program (ECOSAR v0.99h):
Class(es) found:
Aliphatic Amines
Esters
Henrys Law Constant (25 deg C) [HENRYWIN v3.10]:
Bond Method : 7.13E-015 atm-m3/mole
Group Method: Incomplete
Henrys LC [VP/WSol estimate using EPI values]: 2.037E-013 atm-m3/mole
Log Octanol-Air Partition Coefficient (25 deg C) [KOAWIN v1.10]:
Log Kow used: 0.61 (KowWin est)
Log Kaw used: -12.535 (HenryWin est)
Log Koa (KOAWIN v1.10 estimate): 13.145
Log Koa (experimental database): None
Probability of Rapid Biodegradation (BIOWIN v4.10):
Biowin1 (Linear Model) : 1.2946
Biowin2 (Non-Linear Model) : 0.9998
Expert Survey Biodegradation Results:
Biowin3 (Ultimate Survey Model): 2.8045 (weeks )
Biowin4 (Primary Survey Model) : 3.8752 (days )
MITI Biodegradation Probability:
Biowin5 (MITI Linear Model) : 0.6913
Biowin6 (MITI Non-Linear Model): 0.4008
Anaerobic Biodegradation Probability:
Biowin7 (Anaerobic Linear Model): 0.8317
Ready Biodegradability Prediction: YES
Hydrocarbon Biodegradation (BioHCwin v1.01):
Structure incompatible with current estimation method!
Sorption to aerosols (25 Dec C)[AEROWIN v1.00]:
Vapor pressure (liquid/subcooled): 6.8E-005 Pa (5.1E-007 mm Hg)
Log Koa (Koawin est ): 13.145
Kp (particle/gas partition coef. (m3/ug)):
Mackay model : 0.0441
Octanol/air (Koa) model: 3.43
Fraction sorbed to airborne particulates (phi):
Junge-Pankow model : 0.614
Mackay model : 0.779
Octanol/air (Koa) model: 0.996
Atmospheric Oxidation (25 deg C) [AopWin v1.92]:
Hydroxyl Radicals Reaction:
OVERALL OH Rate Constant = 125.2463 E-12 cm3/molecule-sec
Half-Life = 0.085 Days (12-hr day; 1.5E6 OH/cm3)
Half-Life = 1.025 Hrs
Ozone Reaction:
No Ozone Reaction Estimation
Fraction sorbed to airborne particulates (phi): 0.697 (Junge,Mackay)
Note: the sorbed fraction may be resistant to atmospheric oxidation
Soil Adsorption Coefficient (PCKOCWIN v1.66):
Koc : 55.02
Log Koc: 1.741
Aqueous Base/Acid-Catalyzed Hydrolysis (25 deg C) [HYDROWIN v1.67]:
Total Kb for pH > 8 at 25 deg C : 2.805E-003 L/mol-sec
Kb Half-Life at pH 8: 7.829 years
Kb Half-Life at pH 7: 78.287 years
Bioaccumulation Estimates from Log Kow (BCFWIN v2.17):
Log BCF from regression-based method = 0.500 (BCF = 3.162)
log Kow used: 0.61 (estimated)
Volatilization from Water:
Henry LC: 7.13E-015 atm-m3/mole (estimated by Bond SAR Method)
Half-Life from Model River: 1.338E+011 hours (5.573E+009 days)
Half-Life from Model Lake : 1.459E+012 hours (6.08E+010 days)
Removal In Wastewater Treatment:
Total removal: 1.86 percent
Total biodegradation: 0.09 percent
Total sludge adsorption: 1.77 percent
Total to Air: 0.00 percent
(using 10000 hr Bio P,A,S)
Level III Fugacity Model:
Mass Amount Half-Life Emissions
(percent) (hr) (kg/hr)
Air 4.41e-007 2.05 1000
Water 37 360 1000
Soil 63 720 1000
Sediment 0.0702 3.24e+003 0
Persistence Time: 593 hr
Descriptors:
0, 0, 0, 1, 0, 0, 0, 5, 1, 0, 1, 2, 5, 4, 8, 0, 6, 2, 1, 0, 0, 0, 0, 0
| Category | Target | PDB Code | LASSO Score |
| Nuclear Hormone Receptors | PPARg, peroxisome proliferator activated receptor | 1fm9 | 0.03 |
| Kinases | SRC, tyrosine kinase SRC | 2src | 0.01 |
| Other Enzymes | HMGR, hydroxymethylglutaryl-CoA reductase | 1hw8 | 0.01 |
| Other Enzymes | HIVPR, HIV protease | 1hpx | 0.01 |
| Metalloenzymes | PDE5, phosphodiesterase 5 | 1xp0 | 0.01 |
| Nuclear Hormone Receptors | MR, mineralocorticoid receptor | 2aa2 | 0.01 |
| Other Enzymes | PARP, poly(ADP-ribose) polymerase | 1efy | 0.01 |
| Other Enzymes | PNP, purine nucleoside phosphorylase | 1b8o | 0.00 |
| Other Enzymes | AmpC, AmpC beta-lactamase | 1xgj | 0.00 |
| Nuclear Hormone Receptors | ER, estrogen receptor; agonist | 1l2i | 0.00 |
| Nuclear Hormone Receptors | PR, progesterone receptor | 1sr7 | 0.00 |
| Folate Enzymes | DHFR, dihydrofolate reductase | 3dfr | 0.00 |
| Kinases | VEGFr2, vascular endothelial growth factor receptor | 1vr2 | 0.00 |
| Other Enzymes | GPB, glycogen phosphorylase | 1a8i | 0.00 |
| Kinases | FGFr1, fibroblast growth factor receptor kinase | 1agw | 0.00 |
| Other Enzymes | SAHH, S-adenosyl-homocysteine hydrolase | 1a7a | 0.00 |
| Kinases | TK, thymidine kinase | 1kim | 0.00 |
| Folate Enzymes | GART, glycinamide ribonucleotide transformylase | 1c2t | 0.00 |
| Other Enzymes | AChE, acetylcholinesterase | 1eve | 0.00 |
| Kinases | HSP90, human heat shock protein 90 | 1uy6 | 0.00 |
| Serine Proteases | Thrombin | 1ba8 | 0.00 |
| Other Enzymes | NA, neuraminidase | 1a4g | 0.00 |
| Kinases | P38 MAP, P38 mitogen activated protein | 1kv2 | 0.00 |
| Nuclear Hormone Receptors | RXRa, retinoic X receptor R | 1mvc | 0.00 |
| Nuclear Hormone Receptors | AR, androgen receptor | 1xq2 | 0.00 |
| Metalloenzymes | ADA, adenosine deaminase | 1stw | 0.00 |
| Metalloenzymes | ACE, angiotensin-converting enzyme | 1o86 | 0.00 |
| Kinases | PDGFrb, platelet derived growth factor receptor kinase | N/A | 0.00 |
| Serine Proteases | FXa, factor Xa | 1f0r | 0.00 |
| Other Enzymes | HIVRT, HIV reverse transcriptase | 1rt1 | 0.00 |
| Kinases | EGFr, epidermal growth factor receptor | 1m17 | 0.00 |
| Kinases | CDK2, cyclindependent kinase 2 | 1ckp | 0.00 |
| Metalloenzymes | COMT, catechol O-methyltransferase | 1h1d | 0.00 |
| Other Enzymes | COX-2, cyclooxygenase-2 | 1cx2 | 0.00 |
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