InChI=1/C27H33N3O5/c1-5-6-7-8-12-15-21(31)28-20(19-13-10-9-11-14-19)16-22(32)29-24(17(2)3)25(33)23-18(4)26(34)30-27(23)35/h5-15,17-18,20,23-24H,16H2,1-4H3,(H,28,31)(H,29,32)(H,30,34,35)/b6-5+,8-7+,15-12+/t18-,20-,23+,24-/m0/s1

Ads on ChemSpider

Place Your Ad Here

Please login to be able to add spectra, identifiers, links and publications.

Inherent Properties, Identifiers and References

ChemSpider ID:	552562
Empirical Formula:	C₂₇H₃₃N₃O₅
Molecular Weight:	479.568
Nominal Mass:	479 Da
Average Mass:	479.568 Da
Monoisotopic Mass:	479.242021 Da

Systematic Name:

(2E,4E,6E)-N-[(1S)-3-[[(1S)-2-methyl-1-[(3R,4S)-4-methyl-2,5-dioxo-pyrrolidine-3-carbonyl]propyl]amino]-3-oxo-1-phenyl-propyl]octa-2,4,6-trienamide

SMILES:

O=C([C@@H]1C(=O)NC(=O)[C@H]1C)[C@@H](NC(=O)C[C@@H](c2ccccc2)NC(=O)\C=C\C=C\C=C\C)C(C)C

InChI:

InChI=1/C27H33N3O5/c1-5-6-7-8-12-15-21(31)28-20(19-13-10-9-11-14-19)16-22(32)29-24(17(2)3)25(33)23-18(4)26(34)30-27(23)35/h5-15,17-18,20,23-24H,16H2,1-4H3,(H,28,31)(H,29,32)(H,30,34,35)/b6-5+,8-7+,15-12+/t18-,20-,23+,24-/m0/s1

InChIKey:

OHDXGZAYYBMHCY-QSUIEZAABH

Associated Data Sources and Commercial Suppliers

Disclaimer (Details...)

Supplemental Information

Description

Many enzymes have a series of catalytic sites, lined up like beads on a string. A previously unknown link in one of these molecular assembly lines involves an unexpected approach to a common biochemical reaction. AdmF catalyzes the formation of a key amide bond in the biosynthesis of andrimid

Links & References

[DOI: 10.1038/448755a]

Nicholas M. Llewellyn and Jonathan B. Spencer. Biological chemistry: Enzymes line up for assembly, Nature 448, 755-756

Names and Synonyms

Validated by Experts, Validated by Users, Non-Validated, Removed by Users, Redirected by Users, Redirect Approved by Experts

(2E,4E,6E)-N-[(1S)-3-({(2S)-3-Methyl-1-[(3R,4S)-4-methyl-2,5-dioxo-3-pyrrolidinyl]-1-oxo-2-butanyl}amino)-3-oxo-1-phenylpropyl]-2,4,6-octatrienamide

benzenepropanamide, N-[(1S)-2-methyl-1-[[(3R,4S)-4-methyl-2,5-dioxo-3-pyrrolidinyl]carbonyl]propyl]-beta-[[(2E,4E,6E)-1-oxo-2,4,6-octatrien-1-yl]amino]-, (betaS)-

108868-95-7 [RN]

andrimid

benzenepropanamide, N-[(1S)-2-methyl-1-[[(3R,4S)-4-methyl-2,5-dioxo-3-pyrrolidinyl]carbonyl]propyl]-beta-[[(2E,4E,6E)-1-oxo-2,4,6-octatrienyl]amino]-, (betaS)-

Octa-2,4,6-trienoic acid [2-[2-methyl-1-(4-methyl-2,5-dioxo-pyrrolidine-3-carbonyl)-propylcarbamoyl]-1-phenyl-ethyl]-amide

rel-(2E,4E,6E)-N-{(1R)-3-[((1R)-2-methyl-1-{[(3S,4R)-4-methyl-2,5-dioxopyrrolidin-3-yl]carbonyl}propyl)amino]-3-oxo-1-phenylpropyl}octa-2,4,6-trienamide

Predicted Properties

LogP:	ACD/LogP: 2.79 XLogP: 2.50	# of Rule of 5 Violations:	0
ACD/LogD (pH 5.5):	2.79	ACD/LogD (pH 7.4):	2.64
ACD/BCF (pH 5.5):	77.59	ACD/BCF (pH 7.4):	55.39
ACD/KOC (pH 5.5):	782.88	ACD/KOC (pH 7.4):	558.94
#H bond acceptors:	8	#H bond donors:	3
#Freely Rotating Bonds:	11	Polar Surface Area:	95.07 Å²
Index of Refraction:	1.552	Molar Refractivity:	132.65 cm³
Molar Volume:	414.9 cm³	Polarizability:	52.59 10^-24cm³
Surface Tension:	45.6 dyne/cm	Density:	1.155 g/cm³
Flash Point:	234.9 °C	Enthalpy of Vaporization:	115.68 kJ/mol
Boiling Point:	795.4 °C at 760 mmHg	Vapour Pressure:	2.69E-25 mmHg at 25°C

EPI Summary

            
 Log Octanol-Water Partition Coef (SRC):
    Log Kow (KOWWIN v1.67 estimate) =  2.86

 Boiling Pt, Melting Pt, Vapor Pressure Estimations (MPBPWIN v1.42):
    Boiling Pt (deg C):  845.23  (Adapted Stein & Brown method)
    Melting Pt (deg C):  349.84  (Mean or Weighted MP)
    VP(mm Hg,25 deg C):  3.64E-021  (Modified Grain method)
    Subcooled liquid VP: 1.86E-017 mm Hg (25 deg C, Mod-Grain method)

 Water Solubility Estimate from Log Kow (WSKOW v1.41):
    Water Solubility at 25 deg C (mg/L):  3.502
       log Kow used: 2.86 (estimated)
       no-melting pt equation used

 Water Sol Estimate from Fragments:
    Wat Sol (v1.01 est) =  3562.7 mg/L

 ECOSAR Class Program (ECOSAR v0.99h):
    Class(es) found:
       Imides
       Acrylamides

 Henrys Law Constant (25 deg C) [HENRYWIN v3.10]:
   Bond Method :   1.66E-023  atm-m3/mole
   Group Method:   Incomplete
 Henrys LC [VP/WSol estimate using EPI values]:  6.559E-022 atm-m3/mole

 Log Octanol-Air Partition Coefficient (25 deg C) [KOAWIN v1.10]:
  Log Kow used:  2.86  (KowWin est)
  Log Kaw used:  -21.168  (HenryWin est)
      Log Koa (KOAWIN v1.10 estimate):  24.028
      Log Koa (experimental database):  None

 Probability of Rapid Biodegradation (BIOWIN v4.10):
   Biowin1 (Linear Model)         :   1.1829
   Biowin2 (Non-Linear Model)     :   0.9916
 Expert Survey Biodegradation Results:
   Biowin3 (Ultimate Survey Model):   2.3288  (weeks-months)
   Biowin4 (Primary Survey Model) :   3.8184  (days        )
 MITI Biodegradation Probability:
   Biowin5 (MITI Linear Model)    :  -0.3005
   Biowin6 (MITI Non-Linear Model):   0.0005
 Anaerobic Biodegradation Probability:
   Biowin7 (Anaerobic Linear Model): -2.2214
 Ready Biodegradability Prediction:   NO

Hydrocarbon Biodegradation (BioHCwin v1.01):
    Structure incompatible with current estimation method!

 Sorption to aerosols (25 Dec C)[AEROWIN v1.00]:
  Vapor pressure (liquid/subcooled):  2.48E-015 Pa (1.86E-017 mm Hg)
  Log Koa (Koawin est  ): 24.028
   Kp (particle/gas partition coef. (m3/ug)):
       Mackay model           :  1.21E+009 
       Octanol/air (Koa) model:  2.62E+011 
   Fraction sorbed to airborne particulates (phi):
       Junge-Pankow model     :  1 
       Mackay model           :  1 
       Octanol/air (Koa) model:  1 

 Atmospheric Oxidation (25 deg C) [AopWin v1.92]:
   Hydroxyl Radicals Reaction:
      OVERALL OH Rate Constant = 165.4531 E-12 cm3/molecule-sec [Cis-isomer]
      OVERALL OH Rate Constant = 171.9131 E-12 cm3/molecule-sec [Trans-isomer]
      Half-Life =    0.776 Hrs (12-hr day; 1.5E6 OH/cm3) [Cis-isomer]
      Half-Life =    0.747 Hrs (12-hr day; 1.5E6 OH/cm3) [Trans-isomer]
   Ozone Reaction:
      OVERALL Ozone Rate Constant =     1.378750 E-17 cm3/molecule-sec [Cis-]
      OVERALL Ozone Rate Constant =     1.947500 E-17 cm3/molecule-sec [Trans-]
      Half-Life =    19.948 Hrs (at 7E11 mol/cm3) [Cis-isomer]
      Half-Life =    14.123 Hrs (at 7E11 mol/cm3) [Trans-isomer]
   Fraction sorbed to airborne particulates (phi): 1 (Junge,Mackay)
    Note: the sorbed fraction may be resistant to atmospheric oxidation

 Soil Adsorption Coefficient (PCKOCWIN v1.66):
      Koc    :  2.28E+006
      Log Koc:  6.358 

 Aqueous Base/Acid-Catalyzed Hydrolysis (25 deg C) [HYDROWIN v1.67]:
    Rate constants can NOT be estimated for this structure!

 Bioaccumulation Estimates from Log Kow (BCFWIN v2.17):
   Log BCF from regression-based method = 1.501 (BCF = 31.7)
       log Kow used: 2.86 (estimated)

 Volatilization from Water:
    Henry LC:  1.66E-023 atm-m3/mole  (estimated by Bond SAR Method)
    Half-Life from Model River: 7.724E+019  hours   (3.218E+018 days)
    Half-Life from Model Lake : 8.426E+020  hours   (3.511E+019 days)

 Removal In Wastewater Treatment:
    Total removal:               4.66  percent
    Total biodegradation:        0.12  percent
    Total sludge adsorption:     4.55  percent
    Total to Air:                0.00  percent
      (using 10000 hr Bio P,A,S)

 Level III Fugacity Model:
           Mass Amount    Half-Life    Emissions
            (percent)        (hr)       (kg/hr)
   Air       1.96e-005       1.44         1000       
   Water     13.5            900          1000       
   Soil      86.3            1.8e+003     1000       
   Sediment  0.226           8.1e+003     0          
     Persistence Time: 1.75e+003 hr

SimBioSys LASSO

Descriptors: 0, 0, 0, 3, 0, 0, 0, 10, 0, 0, 0, 0, 17, 5, 2, 6, 7, 6, 5, 1, 6, 0, 0, 0

Category	Target	PDB Code	LASSO Score
Metalloenzymes	ACE, angiotensin-converting enzyme	1o86	0.12
Nuclear Hormone Receptors	PPARg, peroxisome proliferator activated receptor	1fm9	0.03
Other Enzymes	NA, neuraminidase	1a4g	0.02
Kinases	SRC, tyrosine kinase SRC	2src	0.01
Other Enzymes	HMGR, hydroxymethylglutaryl-CoA reductase	1hw8	0.01
Other Enzymes	HIVPR, HIV protease	1hpx	0.01
Metalloenzymes	PDE5, phosphodiesterase 5	1xp0	0.01
Nuclear Hormone Receptors	MR, mineralocorticoid receptor	2aa2	0.01
Other Enzymes	PARP, poly(ADP-ribose) polymerase	1efy	0.01
Nuclear Hormone Receptors	ER, estrogen receptor; antagonist	3ert	0.01
Other Enzymes	PNP, purine nucleoside phosphorylase	1b8o	0.00
Other Enzymes	AmpC, AmpC beta-lactamase	1xgj	0.00
Nuclear Hormone Receptors	ER, estrogen receptor; agonist	1l2i	0.00
Folate Enzymes	DHFR, dihydrofolate reductase	3dfr	0.00
Nuclear Hormone Receptors	PR, progesterone receptor	1sr7	0.00
Kinases	VEGFr2, vascular endothelial growth factor receptor	1vr2	0.00
Other Enzymes	GPB, glycogen phosphorylase	1a8i	0.00
Other Enzymes	SAHH, S-adenosyl-homocysteine hydrolase	1a7a	0.00
Kinases	FGFr1, fibroblast growth factor receptor kinase	1agw	0.00
Nuclear Hormone Receptors	RXRa, retinoic X receptor R	1mvc	0.00
Other Enzymes	ALR2, aldose reductase	1ah3	0.00
Other Enzymes	InhA, enoyl ACP reductase	1p44	0.00
Serine Proteases	Thrombin	1ba8	0.00
Kinases	CDK2, cyclindependent kinase 2	1ckp	0.00
Other Enzymes	COX-1, cyclooxygenase-1	1p4g	0.00
Nuclear Hormone Receptors	AR, androgen receptor	1xq2	0.00
Other Enzymes	AChE, acetylcholinesterase	1eve	0.00
Nuclear Hormone Receptors	GR, glucocorticoid receptor	1m2z	0.00
Folate Enzymes	GART, glycinamide ribonucleotide transformylase	1c2t	0.00
Kinases	PDGFrb, platelet derived growth factor receptor kinase	N/A	0.00
Metalloenzymes	COMT, catechol O-methyltransferase	1h1d	0.00
Other Enzymes	COX-2, cyclooxygenase-2	1cx2	0.00
Metalloenzymes	ADA, adenosine deaminase	1stw	0.00
Kinases	HSP90, human heat shock protein 90	1uy6	0.00
Other Enzymes	HIVRT, HIV reverse transcriptase	1rt1	0.00
Kinases	P38 MAP, P38 mitogen activated protein	1kv2	0.00
Serine Proteases	FXa, factor Xa	1f0r	0.00
Kinases	EGFr, epidermal growth factor receptor	1m17	0.00
Kinases	TK, thymidine kinase	1kim	0.00
Serine Proteases	Trypsin	1bju	0.00