InChI=1/C20H24O10/c1-6-12(23)28-11-9(21)18-8-5-7(16(2,3)4)17(18)10(22)13(24)29-15(17)30-20(18,14(25)27-8)19(6,11)26/h6-11,15,21-22,26H,5H2,1-4H3

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Inherent Properties, Identifiers and References

ChemSpider ID:	58739
Empirical Formula:	C₂₀H₂₄O₁₀
Molecular Weight:	424.3986
Nominal Mass:	424 Da
Average Mass:	424.3986 Da
Monoisotopic Mass:	424.136947 Da

Systematic Name:

SMILES:

O=C5OC4C26C(O)C1OC(=O)C(C)C1(O)C56OC3OC(=O)C(O)C23C(C(C)(C)C)C4

InChI:

InChI=1/C20H24O10/c1-6-12(23)28-11-9(21)18-8-5-7(16(2,3)4)17(18)10(22)13(24)29-15(17)30-20(18,14(25)27-8)19(6,11)26/h6-11,15,21-22,26H,5H2,1-4H3

InChIKey:

SQOJOAFXDQDRGF-UHFFFAOYAY

Original Reference(s)

Data Source	External ID(s)
ChemDB	6680039
ChemIDplus	015291777, 105268960
Christopher Data	N/A
DiscoveryGate	65243
DTP/NCI	110257
LeadScope	LS-178439, LS-182973
PubChem	65243

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Supplemental Information

Links & References

GC of ginkolide B on Phenomenex Zebron ZB-1 with FID detection

Names and Synonyms

Validated by Experts, Validated by Users, Non-Validated, Removed by Users, Redirected by Users, Redirect Approved by Experts

15291-77-7 [RN]

5H-Dicyclopenta(b,c)furan-3,5a(6H)-diacetic acid, 6-tert-butyl-3a-carboxyhexahydro-alpha5a,1,2,3,5,8-hexahydroxy-alpha3-methyl-, tri-gamma-lactone

99796-69-7 [RN]

9H-1,7a-(Epoxymethano)-1H,6aH-cyclopenta(c)furo(2,3-b)furo(3',2':3,4)cyclopenta(1,2-d)furan-5,9,12(4H)-trione, 3-(1,1-dimethylethyl)hexahydro-4,7b,11-trihydroxy-8-methyl-, (1R,3S,3aS,4R,6aR,7aR,7bR,8S,10aS,11R,11aR)-

C20H24O10

Gingko lactone

Ginkgolide A

Ginkgolide A, 1-hydroxy-, (1beta)-

More...

Database ID(s)

Validated by Experts, Validated by Users, Non-Validated, Removed by Users, Redirected by Users, Redirect Approved by Experts

BN 52021

BN 52051

BN-52021

NSC110257

Predicted Properties

LogP:	ACD/LogP: 0.52 XLogP: 0.10 ALOGPS: 0.49	# of Rule of 5 Violations:	1
ACD/LogD (pH 5.5):	0.52	ACD/LogD (pH 7.4):	0.52
ACD/BCF (pH 5.5):	1.47	ACD/BCF (pH 7.4):	1.47
ACD/KOC (pH 5.5):	45.79	ACD/KOC (pH 7.4):	45.78
#H bond acceptors:	10	#H bond donors:	3
#Freely Rotating Bonds:	4	Polar Surface Area:	115.82 Å²
Index of Refraction:	1.65	Molar Refractivity:	94.2 cm³
Molar Volume:	258 cm³	Polarizability:	37.34 10^-24cm³
Surface Tension:	79 dyne/cm	Density:	1.64 g/cm³
Flash Point:	274.3 °C	Enthalpy of Vaporization:	126.65 kJ/mol
Boiling Point:	762.4 °C at 760 mmHg	Vapour Pressure:	7.81E-27 mmHg at 25°C

EPI Summary

            
 Log Octanol-Water Partition Coef (SRC):
    Log Kow (KOWWIN v1.67 estimate) =  -2.26

 Boiling Pt, Melting Pt, Vapor Pressure Estimations (MPBPWIN v1.42):
    Boiling Pt (deg C):  629.58  (Adapted Stein & Brown method)
    Melting Pt (deg C):  273.13  (Mean or Weighted MP)
    VP(mm Hg,25 deg C):  1.58E-018  (Modified Grain method)
    Subcooled liquid VP: 8.52E-016 mm Hg (25 deg C, Mod-Grain method)

 Water Solubility Estimate from Log Kow (WSKOW v1.41):
    Water Solubility at 25 deg C (mg/L):  1.838e+005
       log Kow used: -2.26 (estimated)
       no-melting pt equation used

 Water Sol Estimate from Fragments:
    Wat Sol (v1.01 est) =  1e+006 mg/L

 ECOSAR Class Program (ECOSAR v0.99h):
    Class(es) found:
       Esters

 Henrys Law Constant (25 deg C) [HENRYWIN v3.10]:
   Bond Method :   4.76E-016  atm-m3/mole
   Group Method:   Incomplete
 Henrys LC [VP/WSol estimate using EPI values]:  4.800E-024 atm-m3/mole

 Log Octanol-Air Partition Coefficient (25 deg C) [KOAWIN v1.10]:
  Log Kow used:  -2.26  (KowWin est)
  Log Kaw used:  -13.711  (HenryWin est)
      Log Koa (KOAWIN v1.10 estimate):  11.451
      Log Koa (experimental database):  None

 Probability of Rapid Biodegradation (BIOWIN v4.10):
   Biowin1 (Linear Model)         :   0.1185
   Biowin2 (Non-Linear Model)     :   0.3568
 Expert Survey Biodegradation Results:
   Biowin3 (Ultimate Survey Model):   1.9326  (months      )
   Biowin4 (Primary Survey Model) :   3.4043  (days-weeks  )
 MITI Biodegradation Probability:
   Biowin5 (MITI Linear Model)    :   1.2510
   Biowin6 (MITI Non-Linear Model):   0.7143
 Anaerobic Biodegradation Probability:
   Biowin7 (Anaerobic Linear Model): -0.4734
 Ready Biodegradability Prediction:   NO

Hydrocarbon Biodegradation (BioHCwin v1.01):
    Structure incompatible with current estimation method!

 Sorption to aerosols (25 Dec C)[AEROWIN v1.00]:
  Vapor pressure (liquid/subcooled):  1.14E-013 Pa (8.52E-016 mm Hg)
  Log Koa (Koawin est  ): 11.451
   Kp (particle/gas partition coef. (m3/ug)):
       Mackay model           :  2.64E+007 
       Octanol/air (Koa) model:  0.0693 
   Fraction sorbed to airborne particulates (phi):
       Junge-Pankow model     :  1 
       Mackay model           :  1 
       Octanol/air (Koa) model:  0.847 

 Atmospheric Oxidation (25 deg C) [AopWin v1.92]:
   Hydroxyl Radicals Reaction:
      OVERALL OH Rate Constant =  31.4033 E-12 cm3/molecule-sec
      Half-Life =     0.341 Days (12-hr day; 1.5E6 OH/cm3)
      Half-Life =     4.087 Hrs
   Ozone Reaction:
      No Ozone Reaction Estimation
   Fraction sorbed to airborne particulates (phi): 1 (Junge,Mackay)
    Note: the sorbed fraction may be resistant to atmospheric oxidation

 Soil Adsorption Coefficient (PCKOCWIN v1.66):
      Koc    :  11.52
      Log Koc:  1.062 

 Aqueous Base/Acid-Catalyzed Hydrolysis (25 deg C) [HYDROWIN v1.67]:
    Rate constants can NOT be estimated for this structure!

 Bioaccumulation Estimates from Log Kow (BCFWIN v2.17):
   Log BCF from regression-based method = 0.500 (BCF = 3.162)
       log Kow used: -2.26 (estimated)

 Volatilization from Water:
    Henry LC:  4.76E-016 atm-m3/mole  (estimated by Bond SAR Method)
    Half-Life from Model River: 2.534E+012  hours   (1.056E+011 days)
    Half-Life from Model Lake : 2.764E+013  hours   (1.152E+012 days)

 Removal In Wastewater Treatment:
    Total removal:               1.85  percent
    Total biodegradation:        0.09  percent
    Total sludge adsorption:     1.75  percent
    Total to Air:                0.00  percent
      (using 10000 hr Bio P,A,S)

 Level III Fugacity Model:
           Mass Amount    Half-Life    Emissions
            (percent)        (hr)       (kg/hr)
   Air       0.315           8.17         1000       
   Water     53.6            1.44e+003    1000       
   Soil      46              2.88e+003    1000       
   Sediment  0.104           1.3e+004     0          
     Persistence Time: 831 hr

SimBioSys LASSO

Descriptors: 0, 0, 0, 0, 0, 0, 0, 8, 3, 0, 3, 6, 16, 0, 5, 0, 1, 6, 2, 0, 0, 0, 0, 0

Category	Target	PDB Code	LASSO Score
Other Enzymes	SAHH, S-adenosyl-homocysteine hydrolase	1a7a	0.11
Nuclear Hormone Receptors	PPARg, peroxisome proliferator activated receptor	1fm9	0.03
Kinases	SRC, tyrosine kinase SRC	2src	0.01
Other Enzymes	HMGR, hydroxymethylglutaryl-CoA reductase	1hw8	0.01
Other Enzymes	HIVPR, HIV protease	1hpx	0.01
Kinases	HSP90, human heat shock protein 90	1uy6	0.01
Metalloenzymes	PDE5, phosphodiesterase 5	1xp0	0.01
Nuclear Hormone Receptors	MR, mineralocorticoid receptor	2aa2	0.01
Other Enzymes	PARP, poly(ADP-ribose) polymerase	1efy	0.01
Other Enzymes	PNP, purine nucleoside phosphorylase	1b8o	0.00
Other Enzymes	AmpC, AmpC beta-lactamase	1xgj	0.00
Nuclear Hormone Receptors	RXRa, retinoic X receptor R	1mvc	0.00
Nuclear Hormone Receptors	ER, estrogen receptor; agonist	1l2i	0.00
Nuclear Hormone Receptors	PR, progesterone receptor	1sr7	0.00
Folate Enzymes	DHFR, dihydrofolate reductase	3dfr	0.00
Metalloenzymes	ACE, angiotensin-converting enzyme	1o86	0.00
Kinases	VEGFr2, vascular endothelial growth factor receptor	1vr2	0.00
Other Enzymes	GPB, glycogen phosphorylase	1a8i	0.00
Kinases	FGFr1, fibroblast growth factor receptor kinase	1agw	0.00
Other Enzymes	InhA, enoyl ACP reductase	1p44	0.00
Kinases	TK, thymidine kinase	1kim	0.00
Other Enzymes	COX-1, cyclooxygenase-1	1p4g	0.00
Other Enzymes	AChE, acetylcholinesterase	1eve	0.00
Nuclear Hormone Receptors	AR, androgen receptor	1xq2	0.00
Nuclear Hormone Receptors	GR, glucocorticoid receptor	1m2z	0.00
Nuclear Hormone Receptors	ER, estrogen receptor; antagonist	3ert	0.00
Folate Enzymes	GART, glycinamide ribonucleotide transformylase	1c2t	0.00
Kinases	PDGFrb, platelet derived growth factor receptor kinase	N/A	0.00
Metalloenzymes	COMT, catechol O-methyltransferase	1h1d	0.00
Other Enzymes	ALR2, aldose reductase	1ah3	0.00
Other Enzymes	NA, neuraminidase	1a4g	0.00
Other Enzymes	HIVRT, HIV reverse transcriptase	1rt1	0.00
Kinases	P38 MAP, P38 mitogen activated protein	1kv2	0.00
Serine Proteases	Thrombin	1ba8	0.00
Other Enzymes	COX-2, cyclooxygenase-2	1cx2	0.00
Kinases	CDK2, cyclindependent kinase 2	1ckp	0.00
Metalloenzymes	ADA, adenosine deaminase	1stw	0.00
Kinases	EGFr, epidermal growth factor receptor	1m17	0.00
Serine Proteases	FXa, factor Xa	1f0r	0.00
Serine Proteases	Trypsin	1bju	0.00